Yunji Davenport

Director Foghorn Therapeutics

Dr. Yunji Davenport is Director of Drug Discovery at Foghorn Therapeutics, leading protein biochemistry and structural biology efforts to advance therapies targeting the chromatin regulatory system. Her recent work defined the structural and functional basis of the PU.1–BAF interaction, delivering the first high-resolution structure of a human transcription factor–BAF complex and identifying potential small molecule inhibitors of this oncogenic interface. Prior to Foghorn, she was a Jane Coffin Childs Postdoctoral Fellow at Harvard Medical School and earned her Ph.D. from the California Institute of Technology, specializing in structural biology and protein biochemistry.
Notes

Seminars

Thursday 5th February 2026
Structural & Functional Basis of PU.1-BAF Interaction Enables Targeting of Lineage-Specific Transcription
12:00 pm
  • First high-resolution structure of a human transcription factor–BAF complex revealed, mapping the PU.1–BAF binding interface
  • Biochemical studies define the molecular determinants of PU.1–BAF interaction, a key driver in lineage-specific transcription
  • Identification of potential small-molecule inhibitors offers a new therapeutic strategy to disrupt aberrant TF–BAF activity in cancer
Thursday 5th February 2026
Panel Discussion: Tackling Complex Targets & Modalities in Modern Drug Design
3:00 pm

Exploring the unique hurdles of designing drugs for RNA, PROTACs, and beyond. Panellists will discuss structural and physicochemical challenges, computational and biophysical tool limitations, permeability and delivery barriers, and the need for novel screening and optimization strategies to unlock these emerging therapeutic modalities.

Discussion Points:

  • What structural and physicochemical features make RNA, macrocycles, and PROTACs especially challenging compared to small molecules?
  • How can computational chemistry, structural biology, and biophysics be adapted to better interrogate these modalities?
  • What strategies are most promising for improving permeability, stability, and delivery of large or complex molecules?
  • How can we build robust optimization workflows to balance potency, selectivity, and drug-like properties across different modalities?
Wednesday 4th February 2026
Integrating Structural Biology, Biophysics, Computational Chemistry & CADD to Break Down Silos for Smarter Drug Design
4:00 pm

Despite rapid advances in structural techniques, computational models, and biophysical tools, many discovery programs still operate in disciplinary silos. This panel will explore how to weave together structural biology, biophysics, computational chemistry, and CADD to generate a holistic, data-driven view of targets and ligands, ultimately enabling more potent, selective, and developable candidates.

  • How can structural insights, computational modeling, and experimental validation be better integrated into a single design loop?
  • What are the practical barriers, technical, organizational, cultural, that prevent true cross-functional integration, and how can we overcome them?
  • Where has integration already delivered measurable improvements in candidate quality (potency, selectivity, developability)?
  • How can AI and machine learning act as a “bridge” between disciplines, and where are the limits of that approach?
  • What does an ideal, multidisciplinary discovery team look like in practice?
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